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Table 2 Assembly statistics. Statistics of “total transcripts” includes assembled ERCC and phiX transcripts. All other statistics are excluding ERCC and phiX transcripts

From: Molecular analysis of the Sydney rock oyster (Saccostrea glomerata) CO2 stress response

  Reference transcriptome
Total transcripts (#) 718,804
 N50 length (bp) 913
 Mean transcript length (bp) 620
 Min transcript length (bp) 201
 Max transcript length (bp) 36,260
Non-redundant transcripts (#) 708,463
 N50 length (bp) 836
 Mean transcript length (bp) 595
 Min transcript length (bp) 201
 Max transcript length (bp) 36,260
n transcripts < 500 bp 485,634
n transcripts 500-1000 bp 129,025
n transcripts > 1000 bp 93,805
CEGMA
 Complete proteins (%) 93.15
 Partial proteins (%) 98.79